Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 AGGF1P1-201ENST00000509500 2073 ntBASIC13.12□□□□□ -0.31
LHX2P50458 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 RN7SKP214-201ENST00000364208 315 ntBASIC13.12□□□□□ -0.31
LHX2P50458 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 MIR769-201ENST00000390225 118 ntBASIC13.12□□□□□ -0.31
LHX2P50458 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.12□□□□□ -0.31
LHX2P50458 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 AC027237.1-201ENST00000560942 655 ntBASIC13.12□□□□□ -0.31
LHX2P50458 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.12□□□□□ -0.31
LHX2P50458 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.12□□□□□ -0.31
LHX2P50458 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
LHX2P50458 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.12□□□□□ -0.31
LHX2P50458 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
LHX2P50458 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.12□□□□□ -0.31
LHX2P50458 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.12□□□□□ -0.31
LHX2P50458 MYADML-201ENST00000474610 2147 ntBASIC13.12□□□□□ -0.31
LHX2P50458 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LHX2P50458 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.12□□□□□ -0.31
LHX2P50458 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.11□□□□□ -0.31
LHX2P50458 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LHX2P50458 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LHX2P50458 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.11□□□□□ -0.31
LHX2P50458 CICP24-201ENST00000605464 2705 ntBASIC13.11□□□□□ -0.31
LHX2P50458 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.11□□□□□ -0.31
LHX2P50458 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LHX2P50458 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LHX2P50458 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LHX2P50458 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.11□□□□□ -0.31
LHX2P50458 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.11□□□□□ -0.31
LHX2P50458 IGHJ2P-201ENST00000454480 60 ntBASIC13.11□□□□□ -0.31
LHX2P50458 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.11□□□□□ -0.31
LHX2P50458 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
LHX2P50458 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.11□□□□□ -0.31
LHX2P50458 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LHX2P50458 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.11□□□□□ -0.31
LHX2P50458 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.11□□□□□ -0.31
LHX2P50458 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.11□□□□□ -0.31
LHX2P50458 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LHX2P50458 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.11□□□□□ -0.31
LHX2P50458 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms