Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CPT1AP50416 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CPT1AP50416 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.18■□□□□ 0.18
CPT1AP50416 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CPT1AP50416 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.18■□□□□ 0.18
CPT1AP50416 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.18■□□□□ 0.18
CPT1AP50416 AP003398.1-201ENST00000531124 318 ntBASIC16.18■□□□□ 0.18
CPT1AP50416 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 AC009084.3-201ENST00000623356 437 ntBASIC16.18■□□□□ 0.18
CPT1AP50416 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.18■□□□□ 0.18
CPT1AP50416 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 AL109954.1-202ENST00000564051 2148 ntBASIC16.18■□□□□ 0.18
CPT1AP50416 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.18■□□□□ 0.18
CPT1AP50416 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 PAUPAR-201ENST00000630360 2965 ntBASIC16.17■□□□□ 0.18
CPT1AP50416 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CPT1AP50416 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.17■□□□□ 0.18
CPT1AP50416 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CPT1AP50416 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.17■□□□□ 0.18
CPT1AP50416 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.17■□□□□ 0.18
CPT1AP50416 AC138701.2-201ENST00000553634 226 ntBASIC16.17■□□□□ 0.18
CPT1AP50416 AC140658.4-201ENST00000561990 352 ntBASIC16.17■□□□□ 0.18
CPT1AP50416 AC084781.1-201ENST00000613737 656 ntBASIC16.17■□□□□ 0.18
CPT1AP50416 AC025262.2-201ENST00000623975 1056 ntBASIC16.17■□□□□ 0.18
CPT1AP50416 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.17■□□□□ 0.18
CPT1AP50416 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CPT1AP50416 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.17■□□□□ 0.18
CPT1AP50416 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.17■□□□□ 0.18
CPT1AP50416 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPT1AP50416 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CPT1AP50416 HLA-DMA-203ENST00000395305 777 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms