Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.87■□□□□ 0.29
CLCN1P35523 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCN1P35523 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCN1P35523 AC139530.3-201ENST00000620344 690 ntBASIC16.87■□□□□ 0.29
CLCN1P35523 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLCN1P35523 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLCN1P35523 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CLCN1P35523 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN1P35523 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN1P35523 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 MTND2P7-201ENST00000521337 640 ntBASIC16.86■□□□□ 0.29
CLCN1P35523 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN1P35523 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN1P35523 AC004449.1-201ENST00000564240 433 ntBASIC16.86■□□□□ 0.29
CLCN1P35523 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCN1P35523 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.86■□□□□ 0.29
CLCN1P35523 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN1P35523 AL138828.2-201ENST00000615812 383 ntBASIC16.86■□□□□ 0.29
CLCN1P35523 SPDYE12P-201ENST00000618416 771 ntBASIC16.86■□□□□ 0.29
CLCN1P35523 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN1P35523 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN1P35523 AL033527.5-202ENST00000641632 1098 ntBASIC16.86■□□□□ 0.29
CLCN1P35523 AC004899.2-201ENST00000622993 3860 ntBASIC16.86■□□□□ 0.29
CLCN1P35523 AC110048.1-201ENST00000604293 2157 ntBASIC16.86■□□□□ 0.29
CLCN1P35523 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCN1P35523 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLCN1P35523 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN1P35523 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLCN1P35523 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCN1P35523 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCN1P35523 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 DLX4-206ENST00000611342 1662 ntBASIC16.85■□□□□ 0.29
CLCN1P35523 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 HLA-V-204ENST00000476601 1289 ntBASIC16.85■□□□□ 0.29
CLCN1P35523 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 AC025678.2-201ENST00000562061 970 ntBASIC16.85■□□□□ 0.29
CLCN1P35523 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN1P35523 AC051619.7-201ENST00000568314 623 ntBASIC16.85■□□□□ 0.29
CLCN1P35523 AC015911.4-201ENST00000588022 1070 ntBASIC16.85■□□□□ 0.29
CLCN1P35523 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms