Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 KRT17P7-201ENST00000451704 1104 ntBASIC11.33□□□□□ -0.6
HLA-DMBP28068 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AC008494.3-201ENST00000606615 944 ntBASIC11.33□□□□□ -0.6
HLA-DMBP28068 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AC007431.3-201ENST00000623221 587 ntBASIC11.33□□□□□ -0.6
HLA-DMBP28068 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AL122018.1-201ENST00000446607 2310 ntBASIC11.33□□□□□ -0.6
HLA-DMBP28068 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DMBP28068 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DMBP28068 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 C1QBPP1-201ENST00000400117 770 ntBASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 RPL13AP25-201ENST00000484130 612 ntBASIC11.32□□□□□ -0.6
HLA-DMBP28068 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AL359711.2-201ENST00000563105 872 ntBASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.32□□□□□ -0.6
HLA-DMBP28068 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DMBP28068 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DMBP28068 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms