Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
CD40P25942 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.71□□□□□ -0.38
CD40P25942 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CD40P25942 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 FAM90A7P-201ENST00000382628 1395 ntBASIC12.7□□□□□ -0.38
CD40P25942 FAM90A23P-201ENST00000400136 1395 ntBASIC12.7□□□□□ -0.38
CD40P25942 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.7□□□□□ -0.38
CD40P25942 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CD40P25942 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 AL590440.2-201ENST00000641973 1595 ntBASIC12.7□□□□□ -0.38
CD40P25942 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.7□□□□□ -0.38
CD40P25942 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CD40P25942 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 Z97180.1-201ENST00000445173 988 ntBASIC12.7□□□□□ -0.38
CD40P25942 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 RN7SL11P-201ENST00000471305 293 ntBASIC12.7□□□□□ -0.38
CD40P25942 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.7□□□□□ -0.38
CD40P25942 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 AC009779.1-201ENST00000551138 283 ntBASIC12.7□□□□□ -0.38
CD40P25942 RBM8B-201ENST00000555532 525 ntBASIC12.7□□□□□ -0.38
CD40P25942 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.7□□□□□ -0.38
CD40P25942 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.7□□□□□ -0.38
CD40P25942 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.7□□□□□ -0.38
CD40P25942 RN7SL774P-201ENST00000577467 290 ntBASIC12.7□□□□□ -0.38
CD40P25942 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CD40P25942 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.7□□□□□ -0.38
CD40P25942 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 AC136759.1-202ENST00000530858 2194 ntBASIC12.7□□□□□ -0.38
CD40P25942 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD40P25942 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 AC009093.10-201ENST00000641956 1442 ntBASIC12.7□□□□□ -0.38
CD40P25942 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 AC139712.1-201ENST00000378256 1875 ntBASIC12.7□□□□□ -0.38
CD40P25942 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD40P25942 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.69□□□□□ -0.38
CD40P25942 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CD40P25942 RN7SKP214-201ENST00000364208 315 ntBASIC12.69□□□□□ -0.38
CD40P25942 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CD40P25942 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.69□□□□□ -0.38
CD40P25942 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.69□□□□□ -0.38
CD40P25942 RCC2P8-201ENST00000502779 1035 ntBASIC12.69□□□□□ -0.38
CD40P25942 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 398.1 ms