Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 AC023090.2-201ENST00000625182 2110 ntBASIC11.41□□□□□ -0.58
RAB4AP20338 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.4□□□□□ -0.58
RAB4AP20338 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 AC004987.2-201ENST00000395959 1148 ntBASIC11.4□□□□□ -0.58
RAB4AP20338 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.4□□□□□ -0.58
RAB4AP20338 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 OR7E14P-202ENST00000530490 1290 ntBASIC11.4□□□□□ -0.58
RAB4AP20338 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.4□□□□□ -0.58
RAB4AP20338 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB4AP20338 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
RAB4AP20338 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.4□□□□□ -0.58
RAB4AP20338 AL450472.2-201ENST00000603663 1156 ntBASIC11.4□□□□□ -0.58
RAB4AP20338 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB4AP20338 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
RAB4AP20338 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
RAB4AP20338 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB4AP20338 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB4AP20338 AC026797.1-201ENST00000624837 2869 ntBASIC11.4□□□□□ -0.58
RAB4AP20338 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB4AP20338 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RAB4AP20338 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
RAB4AP20338 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.4□□□□□ -0.59
RAB4AP20338 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RAB4AP20338 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RAB4AP20338 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
RAB4AP20338 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
RAB4AP20338 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.4□□□□□ -0.59
RAB4AP20338 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
RAB4AP20338 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms