Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NFKB1P19838 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NFKB1P19838 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.04■□□□□ -0
NFKB1P19838 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.03■□□□□ -0
NFKB1P19838 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 AC006001.1-201ENST00000325130 474 ntBASIC15.03■□□□□ -0
NFKB1P19838 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.03■□□□□ -0
NFKB1P19838 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.03■□□□□ -0
NFKB1P19838 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.03■□□□□ -0
NFKB1P19838 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.03■□□□□ -0
NFKB1P19838 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.03■□□□□ -0
NFKB1P19838 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 RN7SL713P-201ENST00000582127 302 ntBASIC15.03■□□□□ -0
NFKB1P19838 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.03■□□□□ -0
NFKB1P19838 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NFKB1P19838 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.03■□□□□ -0
NFKB1P19838 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
NFKB1P19838 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.03■□□□□ -0
NFKB1P19838 KHSRPP1-201ENST00000427983 1768 ntBASIC15.03■□□□□ -0
NFKB1P19838 RN7SL832P-201ENST00000607781 1756 ntBASIC15.03■□□□□ -0
NFKB1P19838 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NFKB1P19838 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
NFKB1P19838 AL590440.2-201ENST00000641973 1595 ntBASIC15.02■□□□□ -0
NFKB1P19838 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 PDIA3P1-201ENST00000471856 1510 ntBASIC15.02■□□□□ -0
NFKB1P19838 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.02■□□□□ -0
NFKB1P19838 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NFKB1P19838 AC090505.1-201ENST00000430515 1834 ntBASIC15.02■□□□□ -0
NFKB1P19838 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.02■□□□□ -0
NFKB1P19838 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.02■□□□□ -0
NFKB1P19838 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.02■□□□□ -0
NFKB1P19838 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.02■□□□□ -0
NFKB1P19838 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.02■□□□□ -0
NFKB1P19838 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.02■□□□□ -0
NFKB1P19838 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NFKB1P19838 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.02■□□□□ -0
NFKB1P19838 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.02■□□□□ -0
NFKB1P19838 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.02■□□□□ -0
NFKB1P19838 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.02■□□□□ -0
NFKB1P19838 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NFKB1P19838 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.02■□□□□ -0
NFKB1P19838 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.02■□□□□ -0
NFKB1P19838 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.02■□□□□ -0
NFKB1P19838 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.02■□□□□ -0
NFKB1P19838 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NFKB1P19838 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NFKB1P19838 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NFKB1P19838 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NFKB1P19838 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NFKB1P19838 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NFKB1P19838 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NFKB1P19838 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NFKB1P19838 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms