Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 FAM8A4P-201ENST00000435433 1213 ntBASIC13.26□□□□□ -0.29
HLA-DOBP13765 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 CR383656.12-201ENST00000549567 513 ntBASIC13.26□□□□□ -0.29
HLA-DOBP13765 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 AC138951.2-201ENST00000623455 1161 ntBASIC13.26□□□□□ -0.29
HLA-DOBP13765 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DOBP13765 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.25□□□□□ -0.29
HLA-DOBP13765 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 MIR4683-201ENST00000579659 81 ntBASIC13.25□□□□□ -0.29
HLA-DOBP13765 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 AC006453.4-201ENST00000636949 1252 ntBASIC13.25□□□□□ -0.29
HLA-DOBP13765 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms