Protein–RNA interactions for Protein: P10071

GLI3, Transcriptional activator GLI3, humanhuman

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3P10071 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.8■□□□□ 0.6
GLI3P10071 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.8■□□□□ 0.6
GLI3P10071 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GLI3P10071 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GLI3P10071 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GLI3P10071 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GLI3P10071 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GLI3P10071 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.79■□□□□ 0.6
GLI3P10071 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 AC006987.1-201ENST00000413610 527 ntBASIC18.79■□□□□ 0.6
GLI3P10071 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC18.79■□□□□ 0.6
GLI3P10071 AL773545.2-201ENST00000442149 472 ntBASIC18.79■□□□□ 0.6
GLI3P10071 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC18.79■□□□□ 0.6
GLI3P10071 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.79■□□□□ 0.6
GLI3P10071 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 AP000920.1-201ENST00000531824 344 ntBASIC18.79■□□□□ 0.6
GLI3P10071 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 EEF1DP7-201ENST00000580496 513 ntBASIC18.79■□□□□ 0.6
GLI3P10071 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.79■□□□□ 0.6
GLI3P10071 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC18.79■□□□□ 0.6
GLI3P10071 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC18.79■□□□□ 0.6
GLI3P10071 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.79■□□□□ 0.6
GLI3P10071 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GLI3P10071 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GLI3P10071 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GLI3P10071 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GLI3P10071 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.78■□□□□ 0.6
GLI3P10071 NALT1-202ENST00000450304 437 ntTSL 3 BASIC18.78■□□□□ 0.6
GLI3P10071 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC18.78■□□□□ 0.6
GLI3P10071 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.78■□□□□ 0.6
GLI3P10071 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
GLI3P10071 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GLI3P10071 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GLI3P10071 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GLI3P10071 LAP3P2-201ENST00000454686 1454 ntBASIC18.77■□□□□ 0.6
GLI3P10071 FAM226B-201ENST00000602508 1490 ntBASIC18.77■□□□□ 0.6
GLI3P10071 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GLI3P10071 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GLI3P10071 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.77■□□□□ 0.6
GLI3P10071 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GLI3P10071 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC18.77■□□□□ 0.6
GLI3P10071 KRT8P6-201ENST00000399259 1207 ntBASIC18.77■□□□□ 0.6
GLI3P10071 BX679664.3-201ENST00000414070 555 ntBASIC18.77■□□□□ 0.6
GLI3P10071 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.77■□□□□ 0.6
GLI3P10071 AC113935.1-201ENST00000471722 555 ntBASIC18.77■□□□□ 0.6
GLI3P10071 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GLI3P10071 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.77■□□□□ 0.6
GLI3P10071 AL359219.1-201ENST00000556311 934 ntBASIC18.77■□□□□ 0.6
GLI3P10071 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms