Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC9.1□□□□□ -0.95
PKHD1P08F94 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.09□□□□□ -0.95
PKHD1P08F94 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 GUCY2EP-203ENST00000531117 1918 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC9.09□□□□□ -0.95
PKHD1P08F94 SNRPD2P2-201ENST00000473818 333 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 DPY19L2P4-201ENST00000479881 442 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC9.09□□□□□ -0.95
PKHD1P08F94 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC9.09□□□□□ -0.95
PKHD1P08F94 GRAMD4P6-201ENST00000556999 244 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 AC145285.5-201ENST00000562217 361 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC9.09□□□□□ -0.95
PKHD1P08F94 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 GOLGA8UP-201ENST00000527159 1755 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
PKHD1P08F94 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC9.09□□□□□ -0.95
PKHD1P08F94 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC9.09□□□□□ -0.95
PKHD1P08F94 RN7SL605P-201ENST00000577229 281 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PKHD1P08F94 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 ABCC6P2-201ENST00000526069 590 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC9.09□□□□□ -0.95
PKHD1P08F94 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 PAUPAR-201ENST00000630360 2965 ntBASIC9.09□□□□□ -0.95
PKHD1P08F94 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PKHD1P08F94 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PKHD1P08F94 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC9.09□□□□□ -0.96
PKHD1P08F94 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
PKHD1P08F94 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC9.09□□□□□ -0.96
PKHD1P08F94 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 AL008638.4-201ENST00000624792 1315 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 RPL5P21-201ENST00000404620 815 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 RPSAP6-201ENST00000417882 882 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 RNU1-80P-201ENST00000459500 161 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 HNRNPA3P6-201ENST00000472163 1006 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 FAM86JP-202ENST00000484500 988 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 AC048382.6-201ENST00000621980 1223 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms