Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RETP07949 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.89□□□□□ -0.03
RETP07949 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.89□□□□□ -0.03
RETP07949 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RETP07949 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.89□□□□□ -0.03
RETP07949 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.89□□□□□ -0.03
RETP07949 AL592076.1-201ENST00000424448 303 ntBASIC14.89□□□□□ -0.03
RETP07949 AC130709.1-201ENST00000484779 1212 ntBASIC14.89□□□□□ -0.03
RETP07949 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.89□□□□□ -0.03
RETP07949 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC14.89□□□□□ -0.03
RETP07949 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.89□□□□□ -0.03
RETP07949 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 DUX4L46-201ENST00000566845 751 ntBASIC14.89□□□□□ -0.03
RETP07949 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.89□□□□□ -0.03
RETP07949 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RETP07949 MIR4683-201ENST00000579659 81 ntBASIC14.89□□□□□ -0.03
RETP07949 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.89□□□□□ -0.03
RETP07949 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.89□□□□□ -0.03
RETP07949 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RETP07949 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 AC068587.6-202ENST00000641839 5619 ntBASIC14.89□□□□□ -0.03
RETP07949 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RETP07949 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.89□□□□□ -0.03
RETP07949 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.89□□□□□ -0.03
RETP07949 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RETP07949 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RETP07949 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RETP07949 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
RETP07949 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 AC055811.4-201ENST00000624039 1754 ntBASIC14.88□□□□□ -0.03
RETP07949 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.88□□□□□ -0.03
RETP07949 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.88□□□□□ -0.03
RETP07949 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RETP07949 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.88□□□□□ -0.03
RETP07949 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RETP07949 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 HLA-J-204ENST00000495278 958 ntBASIC14.88□□□□□ -0.03
RETP07949 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RETP07949 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.88□□□□□ -0.03
RETP07949 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.88□□□□□ -0.03
RETP07949 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.88□□□□□ -0.03
RETP07949 AC138894.2-201ENST00000602838 371 ntBASIC14.88□□□□□ -0.03
RETP07949 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.88□□□□□ -0.03
RETP07949 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.88□□□□□ -0.03
RETP07949 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.88□□□□□ -0.03
RETP07949 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.88□□□□□ -0.03
RETP07949 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 LINC00528-201ENST00000600723 2160 ntBASIC14.88□□□□□ -0.03
RETP07949 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RETP07949 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.88□□□□□ -0.03
RETP07949 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RETP07949 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RETP07949 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.87□□□□□ -0.03
RETP07949 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RETP07949 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 SHC1P1-201ENST00000425230 1745 ntBASIC14.87□□□□□ -0.03
RETP07949 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms