Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.45□□□□□ -0.26
HMGN1P05114 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HMGN1P05114 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.45□□□□□ -0.26
HMGN1P05114 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 AL662799.1-202ENST00000614205 422 ntBASIC13.45□□□□□ -0.26
HMGN1P05114 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGN1P05114 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGN1P05114 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.45□□□□□ -0.26
HMGN1P05114 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 AC089987.1-201ENST00000551654 2209 ntBASIC13.44□□□□□ -0.26
HMGN1P05114 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HMGN1P05114 MRPL37P1-201ENST00000592451 1337 ntBASIC13.44□□□□□ -0.26
HMGN1P05114 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGN1P05114 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HMGN1P05114 AC012617.1-204ENST00000586340 2305 ntBASIC13.44□□□□□ -0.26
HMGN1P05114 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HMGN1P05114 AC004967.1-201ENST00000453589 447 ntBASIC13.44□□□□□ -0.26
HMGN1P05114 AC026434.2-201ENST00000506094 1078 ntBASIC13.44□□□□□ -0.26
HMGN1P05114 AC135586.1-201ENST00000539323 574 ntBASIC13.44□□□□□ -0.26
HMGN1P05114 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.44□□□□□ -0.26
HMGN1P05114 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
HMGN1P05114 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.44□□□□□ -0.26
HMGN1P05114 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.44□□□□□ -0.26
HMGN1P05114 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.44□□□□□ -0.26
HMGN1P05114 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGN1P05114 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGN1P05114 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.44□□□□□ -0.26
HMGN1P05114 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGN1P05114 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms