Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 DUX4L46-201ENST00000566845 751 ntBASIC15.85■□□□□ 0.13
HLA-DRAP01903 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.85■□□□□ 0.13
HLA-DRAP01903 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 RPL13AP20-201ENST00000459725 609 ntBASIC15.84■□□□□ 0.13
HLA-DRAP01903 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AL583810.1-201ENST00000553344 1045 ntBASIC15.84■□□□□ 0.13
HLA-DRAP01903 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AC132192.2-201ENST00000596206 1147 ntBASIC15.84■□□□□ 0.13
HLA-DRAP01903 AC009955.4-201ENST00000597192 544 ntBASIC15.84■□□□□ 0.13
HLA-DRAP01903 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.84■□□□□ 0.13
HLA-DRAP01903 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DRAP01903 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRAP01903 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
HLA-DRAP01903 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.83■□□□□ 0.13
HLA-DRAP01903 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DRAP01903 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.83■□□□□ 0.13
HLA-DRAP01903 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DRAP01903 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
HLA-DRAP01903 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 RN7SL832P-201ENST00000607781 1756 ntBASIC15.83■□□□□ 0.12
HLA-DRAP01903 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 SNX18-202ENST00000343017 3140 ntBASIC15.83■□□□□ 0.12
HLA-DRAP01903 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 RN7SL560P-201ENST00000577943 264 ntBASIC15.83■□□□□ 0.12
HLA-DRAP01903 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 AL359881.2-201ENST00000602973 570 ntBASIC15.83■□□□□ 0.12
HLA-DRAP01903 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 AL008721.1-201ENST00000609964 604 ntBASIC15.83■□□□□ 0.12
HLA-DRAP01903 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms