Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 LYPLA2P1-203ENST00000447689 696 ntBASIC16.2■□□□□ 0.18
CD4P01730 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.2■□□□□ 0.18
CD4P01730 FTH1P22-201ENST00000456305 520 ntBASIC16.2■□□□□ 0.18
CD4P01730 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.2■□□□□ 0.18
CD4P01730 RN7SL81P-201ENST00000493781 261 ntBASIC16.2■□□□□ 0.18
CD4P01730 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.2■□□□□ 0.18
CD4P01730 AC114947.1-202ENST00000514136 344 ntBASIC16.2■□□□□ 0.18
CD4P01730 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD4P01730 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.2■□□□□ 0.18
CD4P01730 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.2■□□□□ 0.18
CD4P01730 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.2■□□□□ 0.18
CD4P01730 AC141586.1-203ENST00000567242 366 ntBASIC16.2■□□□□ 0.18
CD4P01730 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.2■□□□□ 0.18
CD4P01730 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 AP001184.1-201ENST00000637936 376 ntBASIC16.2■□□□□ 0.18
CD4P01730 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.2■□□□□ 0.18
CD4P01730 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.2■□□□□ 0.18
CD4P01730 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CD4P01730 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.2■□□□□ 0.18
CD4P01730 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.2■□□□□ 0.18
CD4P01730 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.2■□□□□ 0.18
CD4P01730 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.2■□□□□ 0.18
CD4P01730 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD4P01730 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.19■□□□□ 0.18
CD4P01730 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 AC007292.2-201ENST00000593524 1812 ntBASIC16.19■□□□□ 0.18
CD4P01730 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.19■□□□□ 0.18
CD4P01730 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CD4P01730 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.19■□□□□ 0.18
CD4P01730 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.19■□□□□ 0.18
CD4P01730 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD4P01730 RNA5SP359-201ENST00000364838 113 ntBASIC16.19■□□□□ 0.18
CD4P01730 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CD4P01730 Z69890.1-201ENST00000382990 339 ntBASIC16.19■□□□□ 0.18
CD4P01730 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.19■□□□□ 0.18
CD4P01730 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.19■□□□□ 0.18
CD4P01730 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.19■□□□□ 0.18
CD4P01730 MRPL22P1-201ENST00000505398 616 ntBASIC16.19■□□□□ 0.18
CD4P01730 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.19■□□□□ 0.18
CD4P01730 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.19■□□□□ 0.18
CD4P01730 AC005357.2-202ENST00000590507 1060 ntBASIC16.19■□□□□ 0.18
CD4P01730 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.19■□□□□ 0.18
CD4P01730 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CD4P01730 AC105137.3-201ENST00000617588 984 ntBASIC16.19■□□□□ 0.18
CD4P01730 AC005618.3-201ENST00000624928 458 ntBASIC16.19■□□□□ 0.18
CD4P01730 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD4P01730 PKD1P5-201ENST00000532415 10291 ntBASIC16.19■□□□□ 0.18
CD4P01730 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.19■□□□□ 0.18
CD4P01730 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
CD4P01730 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD4P01730 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD4P01730 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.18■□□□□ 0.18
CD4P01730 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.18■□□□□ 0.18
CD4P01730 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.18■□□□□ 0.18
CD4P01730 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.18■□□□□ 0.18
CD4P01730 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CD4P01730 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CD4P01730 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.18■□□□□ 0.18
CD4P01730 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD4P01730 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms