Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
IFNA1P01562 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
IFNA1P01562 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.73□□□□□ -0.53
IFNA1P01562 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 TMPOP1-202ENST00000424642 1267 ntBASIC11.73□□□□□ -0.53
IFNA1P01562 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.73□□□□□ -0.53
IFNA1P01562 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.73□□□□□ -0.53
IFNA1P01562 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.73□□□□□ -0.53
IFNA1P01562 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 AC096734.2-201ENST00000562054 433 ntBASIC11.73□□□□□ -0.53
IFNA1P01562 SAMD11P1-201ENST00000571429 661 ntBASIC11.73□□□□□ -0.53
IFNA1P01562 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.73□□□□□ -0.53
IFNA1P01562 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC11.73□□□□□ -0.53
IFNA1P01562 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
IFNA1P01562 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 AC215219.1-201ENST00000400706 1817 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms