Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCNKO75909 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 AC073621.1-201ENST00000392730 636 ntBASIC12.84□□□□□ -0.35
CCNKO75909 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.84□□□□□ -0.35
CCNKO75909 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 HMGA1P7-201ENST00000406908 502 ntBASIC12.84□□□□□ -0.35
CCNKO75909 LAGE3P1-201ENST00000425356 484 ntBASIC12.84□□□□□ -0.35
CCNKO75909 ATP5G2P1-201ENST00000433580 426 ntBASIC12.84□□□□□ -0.35
CCNKO75909 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 AL049597.2-201ENST00000565575 961 ntBASIC12.84□□□□□ -0.35
CCNKO75909 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCNKO75909 AC006557.2-201ENST00000592985 1240 ntBASIC12.84□□□□□ -0.35
CCNKO75909 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 AL021155.1-201ENST00000438808 2637 ntBASIC12.84□□□□□ -0.35
CCNKO75909 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCNKO75909 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CCNKO75909 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CCNKO75909 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CCNKO75909 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CCNKO75909 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
CCNKO75909 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CCNKO75909 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CCNKO75909 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.83□□□□□ -0.36
CCNKO75909 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 KRT18P27-201ENST00000427733 1299 ntBASIC12.83□□□□□ -0.36
CCNKO75909 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 AC087388.1-201ENST00000571370 1112 ntBASIC12.83□□□□□ -0.36
CCNKO75909 OR7E47P-204ENST00000575924 449 ntBASIC12.83□□□□□ -0.36
CCNKO75909 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.83□□□□□ -0.36
CCNKO75909 ACTL9-202ENST00000612068 1252 ntBASIC12.83□□□□□ -0.36
CCNKO75909 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.83□□□□□ -0.36
CCNKO75909 AP000550.4-202ENST00000639755 178 ntBASIC12.83□□□□□ -0.36
CCNKO75909 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
CCNKO75909 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCNKO75909 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.83□□□□□ -0.36
CCNKO75909 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms