Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC4O75487 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GPC4O75487 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 AL512384.1-201ENST00000406683 331 ntBASIC14.89□□□□□ -0.03
GPC4O75487 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
GPC4O75487 EIF3FP3-201ENST00000434851 1086 ntBASIC14.89□□□□□ -0.03
GPC4O75487 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC4O75487 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC4O75487 GIMAP3P-201ENST00000495150 836 ntBASIC14.89□□□□□ -0.03
GPC4O75487 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.89□□□□□ -0.03
GPC4O75487 TDH-203ENST00000531764 1110 ntBASIC14.89□□□□□ -0.03
GPC4O75487 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 AC132938.2-201ENST00000579188 680 ntBASIC14.89□□□□□ -0.03
GPC4O75487 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC4O75487 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 AL591163.1-201ENST00000641757 987 ntBASIC14.89□□□□□ -0.03
GPC4O75487 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GPC4O75487 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
GPC4O75487 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.89□□□□□ -0.03
GPC4O75487 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 KRT8P35-201ENST00000483942 1338 ntBASIC14.89□□□□□ -0.03
GPC4O75487 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.89□□□□□ -0.03
GPC4O75487 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GPC4O75487 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
GPC4O75487 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC4O75487 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC4O75487 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
GPC4O75487 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.88□□□□□ -0.03
GPC4O75487 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.88□□□□□ -0.03
GPC4O75487 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.88□□□□□ -0.03
GPC4O75487 AC068587.3-201ENST00000526613 355 ntBASIC14.88□□□□□ -0.03
GPC4O75487 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 CR383656.12-201ENST00000549567 513 ntBASIC14.88□□□□□ -0.03
GPC4O75487 AC005225.4-201ENST00000557330 545 ntBASIC14.88□□□□□ -0.03
GPC4O75487 AC015936.2-201ENST00000593177 259 ntBASIC14.88□□□□□ -0.03
GPC4O75487 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.88□□□□□ -0.03
GPC4O75487 IGHV3-72-202ENST00000621503 303 ntBASIC14.88□□□□□ -0.03
GPC4O75487 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC4O75487 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.88□□□□□ -0.03
GPC4O75487 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GPC4O75487 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
GPC4O75487 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC4O75487 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC4O75487 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms