Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
EXTL3O43909 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.97■□□□□ 0.15
EXTL3O43909 AL157407.1-201ENST00000435784 904 ntBASIC15.97■□□□□ 0.15
EXTL3O43909 AL645933.1-201ENST00000440087 609 ntBASIC15.97■□□□□ 0.15
EXTL3O43909 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 KLF2P1-201ENST00000447438 1042 ntBASIC15.97■□□□□ 0.15
EXTL3O43909 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.97■□□□□ 0.15
EXTL3O43909 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 AC005730.2-201ENST00000564549 1184 ntBASIC15.97■□□□□ 0.15
EXTL3O43909 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 AC104982.3-201ENST00000581995 514 ntBASIC15.97■□□□□ 0.15
EXTL3O43909 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 AC005695.3-201ENST00000614522 232 ntBASIC15.97■□□□□ 0.15
EXTL3O43909 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
EXTL3O43909 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
EXTL3O43909 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EXTL3O43909 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
EXTL3O43909 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.96■□□□□ 0.15
EXTL3O43909 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.96■□□□□ 0.15
EXTL3O43909 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
EXTL3O43909 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 AC068418.2-201ENST00000577309 3703 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.96■□□□□ 0.15
EXTL3O43909 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 PFN1P12-201ENST00000455938 534 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.96■□□□□ 0.15
EXTL3O43909 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.96■□□□□ 0.15
EXTL3O43909 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
EXTL3O43909 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
EXTL3O43909 SORD2P-201ENST00000558556 1069 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 AC027237.1-201ENST00000560942 655 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.96■□□□□ 0.15
EXTL3O43909 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.96■□□□□ 0.15
EXTL3O43909 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 MIR3615-201ENST00000581999 87 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 AC243960.2-201ENST00000600996 747 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 Z98259.2-201ENST00000641583 609 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 AL161772.1-201ENST00000610494 4412 ntBASIC15.96■□□□□ 0.15
EXTL3O43909 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
EXTL3O43909 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.96■□□□□ 0.15
EXTL3O43909 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
EXTL3O43909 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EXTL3O43909 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms