Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
PHF1O43189 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 PEG13-201ENST00000631594 5667 ntBASIC12.88□□□□□ -0.35
PHF1O43189 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.88□□□□□ -0.35
PHF1O43189 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.88□□□□□ -0.35
PHF1O43189 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 MPRIPP1-201ENST00000452433 1089 ntBASIC12.88□□□□□ -0.35
PHF1O43189 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.88□□□□□ -0.35
PHF1O43189 AP000812.2-201ENST00000538934 718 ntBASIC12.88□□□□□ -0.35
PHF1O43189 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.88□□□□□ -0.35
PHF1O43189 PTP4A1P2-201ENST00000546033 454 ntBASIC12.88□□□□□ -0.35
PHF1O43189 AC079316.1-201ENST00000548397 411 ntBASIC12.88□□□□□ -0.35
PHF1O43189 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.88□□□□□ -0.35
PHF1O43189 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.88□□□□□ -0.35
PHF1O43189 AC107373.2-201ENST00000607735 490 ntBASIC12.88□□□□□ -0.35
PHF1O43189 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.88□□□□□ -0.35
PHF1O43189 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PHF1O43189 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF1O43189 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF1O43189 DRD5P1-201ENST00000456605 1438 ntBASIC12.88□□□□□ -0.35
PHF1O43189 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 FXNP2-201ENST00000411625 547 ntBASIC12.87□□□□□ -0.35
PHF1O43189 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 ENPP7P5-201ENST00000541031 1031 ntBASIC12.87□□□□□ -0.35
PHF1O43189 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF1O43189 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms