Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.14□□□□□ -0.15
CLOCKO15516 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 MIR661-201ENST00000384842 89 ntBASIC14.14□□□□□ -0.15
CLOCKO15516 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.14□□□□□ -0.15
CLOCKO15516 FAM207CP-201ENST00000443486 507 ntBASIC14.14□□□□□ -0.15
CLOCKO15516 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.14□□□□□ -0.15
CLOCKO15516 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.14□□□□□ -0.15
CLOCKO15516 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CLOCKO15516 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.14□□□□□ -0.15
CLOCKO15516 AL590560.3-201ENST00000623350 461 ntBASIC14.14□□□□□ -0.15
CLOCKO15516 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.14□□□□□ -0.15
CLOCKO15516 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.14□□□□□ -0.15
CLOCKO15516 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.14□□□□□ -0.15
CLOCKO15516 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.14□□□□□ -0.15
CLOCKO15516 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLOCKO15516 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.14□□□□□ -0.15
CLOCKO15516 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLOCKO15516 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CLOCKO15516 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLOCKO15516 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.13□□□□□ -0.15
CLOCKO15516 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLOCKO15516 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CLOCKO15516 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 KRT18P64-201ENST00000434946 1219 ntBASIC14.13□□□□□ -0.15
CLOCKO15516 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.13□□□□□ -0.15
CLOCKO15516 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.13□□□□□ -0.15
CLOCKO15516 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.13□□□□□ -0.15
CLOCKO15516 AL079307.3-201ENST00000556114 283 ntBASIC14.13□□□□□ -0.15
CLOCKO15516 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.13□□□□□ -0.15
CLOCKO15516 AC239800.4-201ENST00000603712 296 ntBASIC14.13□□□□□ -0.15
CLOCKO15516 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CLOCKO15516 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.13□□□□□ -0.15
CLOCKO15516 AL360270.3-201ENST00000609118 1348 ntBASIC14.13□□□□□ -0.15
CLOCKO15516 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CLOCKO15516 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLOCKO15516 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 AL591122.2-201ENST00000624125 1853 ntBASIC14.12□□□□□ -0.15
CLOCKO15516 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLOCKO15516 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CLOCKO15516 AC015909.5-201ENST00000624336 2266 ntBASIC14.12□□□□□ -0.15
CLOCKO15516 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms