Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LINC00552-201ENST00000625151 2579 ntBASIC15.53■□□□□ 0.08
CLDN5O00501 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLDN5O00501 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN5O00501 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN5O00501 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
CLDN5O00501 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLDN5O00501 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN5O00501 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN5O00501 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
CLDN5O00501 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN5O00501 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN5O00501 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN5O00501 AC016700.1-201ENST00000429424 312 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN5O00501 FAM58BP-201ENST00000439056 645 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 EIF4HP1-201ENST00000453115 687 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN5O00501 AKR7A2P1-201ENST00000460134 915 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN5O00501 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN5O00501 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.52■□□□□ 0.08
CLDN5O00501 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN5O00501 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN5O00501 AC020914.3-201ENST00000594712 304 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 AC009884.2-201ENST00000603110 324 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 AC090164.2-201ENST00000611487 516 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 AC244452.3-201ENST00000636814 210 ntBASIC15.52■□□□□ 0.08
CLDN5O00501 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN5O00501 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLDN5O00501 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CLDN5O00501 AC139749.1-202ENST00000617529 3139 ntBASIC15.52■□□□□ 0.07
CLDN5O00501 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN5O00501 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.52■□□□□ 0.07
CLDN5O00501 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLDN5O00501 AGGF1P1-201ENST00000509500 2073 ntBASIC15.52■□□□□ 0.07
CLDN5O00501 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.51■□□□□ 0.07
CLDN5O00501 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.51■□□□□ 0.07
CLDN5O00501 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 CYP4F23P-201ENST00000593402 1579 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 HLA-J-204ENST00000495278 958 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 AC106794.1-201ENST00000506935 792 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 ACTG1P17-201ENST00000558391 1119 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 AC013355.1-201ENST00000562625 723 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 AC103810.3-201ENST00000583567 96 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN5O00501 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms