Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC009093.2-202ENST00000620513 2079 ntBASIC11.91□□□□□ -0.5
SRRM4A7MD48 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AC011498.7-201ENST00000624986 2027 ntBASIC11.91□□□□□ -0.5
SRRM4A7MD48 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 HMGN1P19-201ENST00000436976 333 ntBASIC11.91□□□□□ -0.5
SRRM4A7MD48 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 FTLP10-202ENST00000505798 471 ntBASIC11.91□□□□□ -0.5
SRRM4A7MD48 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 GNRHR2-203ENST00000581100 1187 ntBASIC11.91□□□□□ -0.5
SRRM4A7MD48 BX088702.1-201ENST00000610784 235 ntBASIC11.91□□□□□ -0.5
SRRM4A7MD48 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AP001002.3-201ENST00000623482 206 ntBASIC11.91□□□□□ -0.5
SRRM4A7MD48 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.91□□□□□ -0.5
SRRM4A7MD48 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SRRM4A7MD48 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 AC098614.1-201ENST00000368528 745 ntBASIC11.9□□□□□ -0.5
SRRM4A7MD48 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 AC139712.1-201ENST00000378256 1875 ntBASIC11.9□□□□□ -0.5
SRRM4A7MD48 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SRRM4A7MD48 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.9□□□□□ -0.5
SRRM4A7MD48 RN7SL837P-201ENST00000463010 287 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms