Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 LINC02486-201ENST00000604157 3000 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 AL139094.1-201ENST00000405549 1188 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SPDYE7P-202ENST00000420373 878 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 AC007969.1-201ENST00000433675 447 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 AC103988.2-201ENST00000561804 725 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 MTDHP5-201ENST00000598980 586 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 AP000437.1-201ENST00000624057 2085 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 AL928654.5-201ENST00000624831 2501 ntBASIC12.87□□□□□ -0.35
SHISA3A0PJX4 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SHISA3A0PJX4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AL031719.1-201ENST00000623365 2587 ntBASIC12.86□□□□□ -0.35
SHISA3A0PJX4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms