Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 RN7SL147P-201ENST00000487345 298 ntBASIC23.73■■□□□ 1.39
BIVM-ERCC5R4GMW8 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC23.73■■□□□ 1.39
BIVM-ERCC5R4GMW8 CISD2-202ENST00000503643 808 ntTSL 2 BASIC23.73■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC23.73■■□□□ 1.39
BIVM-ERCC5R4GMW8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC23.73■■□□□ 1.39
BIVM-ERCC5R4GMW8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
BIVM-ERCC5R4GMW8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 USP17L6P-201ENST00000382470 1197 ntBASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BIVM-ERCC5R4GMW8 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC008026.2-201ENST00000495438 348 ntBASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC023968.2-201ENST00000560593 1049 ntBASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 RNF146-211ENST00000609447 607 ntTSL 4 BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 AP000769.1-203ENST00000637245 208 ntBASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
BIVM-ERCC5R4GMW8 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
BIVM-ERCC5R4GMW8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 MTHFR-210ENST00000641407 2387 ntBASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 AL929302.1-201ENST00000426556 871 ntBASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC083801.1-201ENST00000491689 358 ntBASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 GOLGA2P8-201ENST00000505201 779 ntBASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 BATF-202ENST00000555504 361 ntTSL 2 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
BIVM-ERCC5R4GMW8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC068760.1-201ENST00000493579 1953 ntBASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 ABCD1P4-201ENST00000399687 604 ntBASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 NME6-208ENST00000435684 599 ntTSL 2 BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BIVM-ERCC5R4GMW8 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms