Protein–RNA interactions for Protein: Q9Y2T2

AP3M1, AP-3 complex subunit mu-1, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1Q9Y2T2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3M1Q9Y2T2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 RPSAP43-201ENST00000402237 625 ntBASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AC107890.1-201ENST00000422478 521 ntBASIC14□□□□□ -0.17
AP3M1Q9Y2T2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AP006288.1-201ENST00000446065 395 ntBASIC14□□□□□ -0.17
AP3M1Q9Y2T2 VDAC1P7-201ENST00000462417 847 ntBASIC14□□□□□ -0.17
AP3M1Q9Y2T2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 SRD5A3P1-201ENST00000603021 949 ntBASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AL662799.1-202ENST00000614205 422 ntBASIC14□□□□□ -0.17
AP3M1Q9Y2T2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3M1Q9Y2T2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 RN7SL399P-201ENST00000471648 279 ntBASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 RRP7BP-205ENST00000566851 833 ntBASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 Z92544.3-201ENST00000624747 417 ntBASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.99□□□□□ -0.17
AP3M1Q9Y2T2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms