Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 MIR4754-201ENST00000582477 89 ntBASIC14.25□□□□□ -0.13
LHX6Q9UPM6 E2F3P1-201ENST00000589887 1230 ntBASIC14.25□□□□□ -0.13
LHX6Q9UPM6 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 BNIP3P13-201ENST00000599968 566 ntBASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 ME2P1-201ENST00000426028 1970 ntBASIC14.25□□□□□ -0.13
LHX6Q9UPM6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 ALOX12P2-203ENST00000570921 1945 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 ACTBP7-201ENST00000418351 1124 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SERBP1P2-201ENST00000436888 1164 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 ZACNP1-201ENST00000612259 710 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AC084781.1-201ENST00000613737 656 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AL136295.7-201ENST00000619226 1200 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AC006386.1-201ENST00000619436 415 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AC017037.4-201ENST00000624526 826 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 NAP1L6-202ENST00000641404 1222 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.24□□□□□ -0.13
LHX6Q9UPM6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX6Q9UPM6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms