Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
LINC00474Q9P2X8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 MIR661-201ENST00000384842 89 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 GIMAP3P-201ENST00000495150 836 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 AC004790.1-201ENST00000612686 536 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 WFDC1-204ENST00000613603 549 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ABBA01031660.1-201ENST00000635219 756 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ZBED1P1-201ENST00000502364 1930 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 REXO1L4P-201ENST00000605109 1937 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PPT1-215ENST00000641471 2368 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 DNM1P41-201ENST00000623634 3350 ntBASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC00474Q9P2X8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms