Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GCNT4Q9P109 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GCNT4Q9P109 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GCNT4Q9P109 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GCNT4Q9P109 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GCNT4Q9P109 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
GCNT4Q9P109 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GCNT4Q9P109 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
GCNT4Q9P109 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AC020910.5-201ENST00000623668 1865 ntBASIC16.12■□□□□ 0.17
GCNT4Q9P109 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 GCOM2-201ENST00000509133 1104 ntBASIC16.12■□□□□ 0.17
GCNT4Q9P109 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AL583810.1-201ENST00000553344 1045 ntBASIC16.12■□□□□ 0.17
GCNT4Q9P109 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 RN7SL48P-201ENST00000579283 293 ntBASIC16.12■□□□□ 0.17
GCNT4Q9P109 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AC138466.3-201ENST00000619983 221 ntBASIC16.12■□□□□ 0.17
GCNT4Q9P109 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 MRPL37P1-201ENST00000592451 1337 ntBASIC16.12■□□□□ 0.17
GCNT4Q9P109 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 INE2-201ENST00000630399 1874 ntBASIC16.12■□□□□ 0.17
GCNT4Q9P109 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GCNT4Q9P109 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCNT4Q9P109 GRK6P1-201ENST00000400595 1711 ntBASIC16.11■□□□□ 0.17
GCNT4Q9P109 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 REXO1L6P-201ENST00000603433 1515 ntBASIC16.11■□□□□ 0.17
GCNT4Q9P109 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 MESTP3-201ENST00000503460 968 ntBASIC16.11■□□□□ 0.17
GCNT4Q9P109 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 KRT90P-201ENST00000549264 1064 ntBASIC16.11■□□□□ 0.17
GCNT4Q9P109 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCNT4Q9P109 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
GCNT4Q9P109 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms