Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SPDYE22P-201ENST00000582158 798 ntBASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AL137783.1-201ENST00000623494 1896 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AL442647.2-201ENST00000429864 857 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 TMEM261P1-201ENST00000604899 340 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AL662799.1-202ENST00000614205 422 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AC023090.2-201ENST00000625182 2110 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AL358472.5-202ENST00000641448 1267 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AL731571.1-201ENST00000617058 5428 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 AC093525.8-201ENST00000624099 1342 ntBASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LIN7CQ9NUP9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms