Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTA1Q9NP79 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTA1Q9NP79 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTA1Q9NP79 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 AL136379.1-201ENST00000623471 2642 ntBASIC16.38■□□□□ 0.21
VTA1Q9NP79 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTA1Q9NP79 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTA1Q9NP79 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VTA1Q9NP79 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 MARK2P16-201ENST00000605714 1723 ntBASIC16.37■□□□□ 0.21
VTA1Q9NP79 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AC079112.1-201ENST00000454972 939 ntBASIC16.37■□□□□ 0.21
VTA1Q9NP79 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.37■□□□□ 0.21
VTA1Q9NP79 AL591471.1-201ENST00000621855 229 ntBASIC16.37■□□□□ 0.21
VTA1Q9NP79 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTA1Q9NP79 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.37■□□□□ 0.21
VTA1Q9NP79 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 AC022532.1-201ENST00000624563 1728 ntBASIC16.36■□□□□ 0.21
VTA1Q9NP79 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 AP002353.1-201ENST00000528257 1599 ntBASIC16.36■□□□□ 0.21
VTA1Q9NP79 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTA1Q9NP79 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VTA1Q9NP79 RN7SL81P-201ENST00000493781 261 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms