Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AC104982.3-201ENST00000581995 514 ntBASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP13A1Q9HD20 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MIR663B-201ENST00000408361 115 ntBASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 DUX4L46-201ENST00000566845 751 ntBASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MIR4538-201ENST00000581377 78 ntBASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MIR6799-201ENST00000620297 69 ntBASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AP001267.2-201ENST00000532619 2086 ntBASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AC068418.2-201ENST00000577309 3703 ntBASIC15.12■□□□□ 0.01
ATP13A1Q9HD20 AC007326.2-201ENST00000624224 7579 ntBASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP13A1Q9HD20 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms