Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RPSAP70-201ENST00000504462 864 ntBASIC13.35□□□□□ -0.27
CHD8Q9HCK8 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHD8Q9HCK8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC022080.1-201ENST00000366255 781 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC092573.1-201ENST00000433054 884 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 VENTXP3-201ENST00000546480 773 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AL031768.1-201ENST00000606542 701 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 RN7SKP212-201ENST00000410851 328 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC103563.1-201ENST00000429316 123 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 DUX4L31-201ENST00000446466 1136 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 PRSS3P1-201ENST00000503996 742 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 ALG10-202ENST00000538927 571 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AL136982.5-201ENST00000605222 294 ntBASIC13.34□□□□□ -0.27
CHD8Q9HCK8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHD8Q9HCK8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 AC099343.1-201ENST00000513481 609 ntBASIC13.33□□□□□ -0.27
CHD8Q9HCK8 RN7SL556P-201ENST00000582856 298 ntBASIC13.33□□□□□ -0.27
CHD8Q9HCK8 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 AC005777.1-201ENST00000588332 187 ntBASIC13.33□□□□□ -0.27
CHD8Q9HCK8 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 LILRP1-201ENST00000444199 1370 ntBASIC13.33□□□□□ -0.27
CHD8Q9HCK8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
CHD8Q9HCK8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms