Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 MYADML-201ENST00000474610 2147 ntBASIC18.23■□□□□ 0.51
UPF2Q9HAU5 AL359183.1-201ENST00000623796 2132 ntBASIC18.23■□□□□ 0.51
UPF2Q9HAU5 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 AC011840.2-201ENST00000563063 1520 ntBASIC18.23■□□□□ 0.51
UPF2Q9HAU5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 MIR574-201ENST00000385209 96 ntBASIC18.22■□□□□ 0.51
UPF2Q9HAU5 NUS1P3-201ENST00000423502 862 ntBASIC18.22■□□□□ 0.51
UPF2Q9HAU5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AC069262.1-201ENST00000539058 672 ntBASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.22■□□□□ 0.51
UPF2Q9HAU5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AL138799.1-201ENST00000448213 1675 ntBASIC18.22■□□□□ 0.51
UPF2Q9HAU5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF2Q9HAU5 AC105206.1-202ENST00000314927 2368 ntBASIC18.22■□□□□ 0.51
UPF2Q9HAU5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 MIR3687-2-201ENST00000577708 61 ntBASIC18.21■□□□□ 0.51
UPF2Q9HAU5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 AC092364.2-202ENST00000597012 1073 ntBASIC18.21■□□□□ 0.51
UPF2Q9HAU5 MIR3687-1-201ENST00000614492 61 ntBASIC18.21■□□□□ 0.51
UPF2Q9HAU5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 AL158212.4-201ENST00000624062 1286 ntBASIC18.21■□□□□ 0.51
UPF2Q9HAU5 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPF2Q9HAU5 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UPF2Q9HAU5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
UPF2Q9HAU5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UPF2Q9HAU5 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.2■□□□□ 0.5
UPF2Q9HAU5 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms