Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 FER1L4-210ENST00000615531 5998 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AL391903.1-201ENST00000407513 365 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AC006001.3-205ENST00000428370 579 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AC092573.1-201ENST00000433054 884 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 Z84721.1-201ENST00000438841 372 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 RPS15P5-201ENST00000449885 432 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 MIR4265-201ENST00000582152 99 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 RN7SL322P-201ENST00000583519 299 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 AC123912.6-201ENST00000612657 315 ntBASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL25A1Q9BXS0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 PDXDC2P-206ENST00000534700 1315 ntBASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC073210.1-201ENST00000414799 232 ntBASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 OARD1-214ENST00000486443 764 ntTSL 3 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 PDPN-208ENST00000509009 571 ntTSL 4 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC105424.1-201ENST00000514583 209 ntBASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 DNM1P50-201ENST00000565767 508 ntBASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 MIR6741-201ENST00000618782 63 ntBASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL25A1Q9BXS0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.46□□□□□ -0.1
COL25A1Q9BXS0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms