Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 BX088702.1-201ENST00000610784 235 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AC128714.1-201ENST00000637035 887 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 SALL4P5-201ENST00000419001 1760 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 CICP4-201ENST00000447359 2812 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 MAGEA5-201ENST00000446757 942 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 RNMTL1P1-201ENST00000454103 560 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 NUP210P1-202ENST00000504322 710 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 GCOM2-201ENST00000509133 1104 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 LINC01230-201ENST00000625222 3017 ntBASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPAP1Q9BWH6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 AL136301.1-201ENST00000615830 422 ntBASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 AC004923.1-202ENST00000642106 209 ntBASIC17.83■□□□□ 0.45
RPAP1Q9BWH6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 AC006504.5-208ENST00000588784 2401 ntBASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 AC004899.1-201ENST00000424687 1714 ntBASIC17.83■□□□□ 0.44
RPAP1Q9BWH6 SHC1P1-201ENST00000425230 1745 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms