Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 AC105206.1-202ENST00000314927 2368 ntBASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HDHD3Q9BSH5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 KRT8P24-201ENST00000560290 1559 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AC055876.3-201ENST00000431496 288 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 RPL13AP25-201ENST00000484130 612 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AC022616.1-201ENST00000518688 554 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 BRI3BPP1-201ENST00000594224 787 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AC138649.4-201ENST00000612222 287 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 MIR8072-201ENST00000614241 80 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AC087386.2-201ENST00000623212 4637 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 AL137784.3-201ENST00000623858 2288 ntBASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.53□□□□□ -0.4
HDHD3Q9BSH5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.52□□□□□ -0.4
HDHD3Q9BSH5 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 MRPS18AP1-201ENST00000414458 589 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms