Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MUC4Q99102 AC140912.1-201ENST00000577171 1054 ntBASIC10.86□□□□□ -0.67
MUC4Q99102 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MUC4Q99102 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
MUC4Q99102 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MUC4Q99102 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MUC4Q99102 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.86□□□□□ -0.67
MUC4Q99102 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
MUC4Q99102 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MUC4Q99102 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
MUC4Q99102 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
MUC4Q99102 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 AL138799.1-201ENST00000448213 1675 ntBASIC10.85□□□□□ -0.67
MUC4Q99102 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.85□□□□□ -0.67
MUC4Q99102 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.85□□□□□ -0.67
MUC4Q99102 AC104596.2-201ENST00000512793 793 ntBASIC10.85□□□□□ -0.67
MUC4Q99102 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 AC123567.1-201ENST00000548294 1261 ntBASIC10.85□□□□□ -0.67
MUC4Q99102 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 AC093726.1-201ENST00000608064 963 ntBASIC10.85□□□□□ -0.67
MUC4Q99102 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 COX11-210ENST00000639671 696 ntBASIC10.85□□□□□ -0.67
MUC4Q99102 INE2-201ENST00000630399 1874 ntBASIC10.85□□□□□ -0.67
MUC4Q99102 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.85□□□□□ -0.67
MUC4Q99102 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 AC018665.1-201ENST00000622927 1362 ntBASIC10.85□□□□□ -0.67
MUC4Q99102 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
MUC4Q99102 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.85□□□□□ -0.67
MUC4Q99102 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MUC4Q99102 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
MUC4Q99102 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
MUC4Q99102 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
MUC4Q99102 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.84□□□□□ -0.67
MUC4Q99102 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC10.84□□□□□ -0.67
MUC4Q99102 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC10.84□□□□□ -0.67
MUC4Q99102 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.84□□□□□ -0.67
MUC4Q99102 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC10.84□□□□□ -0.67
MUC4Q99102 AC124283.3-201ENST00000570869 594 ntBASIC10.84□□□□□ -0.67
MUC4Q99102 RN7SL190P-201ENST00000582519 257 ntBASIC10.84□□□□□ -0.67
MUC4Q99102 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.84□□□□□ -0.67
MUC4Q99102 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.84□□□□□ -0.67
MUC4Q99102 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.84□□□□□ -0.67
MUC4Q99102 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
MUC4Q99102 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
MUC4Q99102 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
MUC4Q99102 BEND3P1-201ENST00000421591 1944 ntBASIC10.84□□□□□ -0.67
MUC4Q99102 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.84□□□□□ -0.67
MUC4Q99102 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.84□□□□□ -0.67
MUC4Q99102 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
MUC4Q99102 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms