Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AC097359.2-201ENST00000604992 2389 ntBASIC13.57□□□□□ -0.24
SNX18Q96RF0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 AC007541.1-201ENST00000570282 1469 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 AL132655.2-201ENST00000596276 594 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 AL049840.4-201ENST00000602422 811 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 AC107373.2-201ENST00000607735 490 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 PRSS30P-206ENST00000641773 873 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.56□□□□□ -0.24
SNX18Q96RF0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 AC018665.1-201ENST00000622927 1362 ntBASIC13.56□□□□□ -0.24
SNX18Q96RF0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNX18Q96RF0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AL589987.1-201ENST00000453380 819 ntBASIC13.55□□□□□ -0.24
SNX18Q96RF0 TPT1P11-201ENST00000458482 498 ntBASIC13.55□□□□□ -0.24
SNX18Q96RF0 RN7SL399P-201ENST00000471648 279 ntBASIC13.55□□□□□ -0.24
SNX18Q96RF0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 SPDYE18-201ENST00000510091 1050 ntBASIC13.55□□□□□ -0.24
SNX18Q96RF0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AC104794.3-201ENST00000566840 1248 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms