Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AC006335.1-201ENST00000445200 547 ntBASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AL035414.1-201ENST00000451327 857 ntBASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AC242376.1-201ENST00000559033 726 ntBASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AC015909.3-201ENST00000572855 1794 ntBASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 KRT8P28-201ENST00000433288 1390 ntBASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AC018629.1-201ENST00000623381 1736 ntBASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AC069218.1-201ENST00000435269 762 ntBASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 MIR5572-201ENST00000583188 137 ntBASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AC133540.1-201ENST00000620845 1019 ntBASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC85AQ96PX6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms