Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 TFAMP1-201ENST00000412727 736 ntBASIC11.28□□□□□ -0.6
AP1S3Q96PC3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 AC092123.2-201ENST00000611189 5421 ntBASIC11.28□□□□□ -0.6
AP1S3Q96PC3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 AC089987.1-201ENST00000551654 2209 ntBASIC11.28□□□□□ -0.6
AP1S3Q96PC3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
AP1S3Q96PC3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AZGP1P1-201ENST00000411909 902 ntBASIC11.27□□□□□ -0.61
AP1S3Q96PC3 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AL671277.1-201ENST00000429656 993 ntBASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AC007967.2-201ENST00000432613 625 ntBASIC11.27□□□□□ -0.61
AP1S3Q96PC3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AP000842.3-202ENST00000569238 1080 ntBASIC11.27□□□□□ -0.61
AP1S3Q96PC3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 RN7SL510P-201ENST00000581311 263 ntBASIC11.27□□□□□ -0.61
AP1S3Q96PC3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
AP1S3Q96PC3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms