Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALPK3Q96L96 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 POLR2LP1-206ENST00000444785 187 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 AC025594.1-201ENST00000469533 543 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 EMP3-204ENST00000596315 761 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 AL009176.1-201ENST00000607876 650 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 FAM226B-201ENST00000602508 1490 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 BX679664.3-201ENST00000414070 555 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ALPK3Q96L96 AL356000.1-201ENST00000441073 1238 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 AC113935.1-201ENST00000471722 555 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 RN7SL375P-201ENST00000492442 298 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 AC099328.1-201ENST00000498809 1030 ntBASIC15.56■□□□□ 0.08
ALPK3Q96L96 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 HCG18-241ENST00000602290 821 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.56■□□□□ 0.08
ALPK3Q96L96 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 MIR611-201ENST00000384869 67 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 AC103563.1-201ENST00000429316 123 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 VDAC1P11-201ENST00000458323 852 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 LY6E-215ENST00000523847 427 ntTSL 3 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AP003040.1-201ENST00000532044 1024 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AL008638.4-201ENST00000624792 1315 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AL137244.1-201ENST00000422931 865 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 AC147876.1-201ENST00000504408 322 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC15.55■□□□□ 0.08
ALPK3Q96L96 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.55■□□□□ 0.08
ALPK3Q96L96 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALPK3Q96L96 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.54■□□□□ 0.08
ALPK3Q96L96 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ALPK3Q96L96 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ALPK3Q96L96 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ALPK3Q96L96 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ALPK3Q96L96 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
ALPK3Q96L96 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.54■□□□□ 0.08
ALPK3Q96L96 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ALPK3Q96L96 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.54■□□□□ 0.08
ALPK3Q96L96 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms