Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNX27Q96L92 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX27Q96L92 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SNX27Q96L92 TUBBP5-203ENST00000508529 1334 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 AC144522.1-201ENST00000625111 1658 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 CYP4F23P-201ENST00000593402 1579 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 AL354702.1-201ENST00000442006 1960 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 AC015688.4-201ENST00000580780 1647 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.88■□□□□ 0.13
SNX27Q96L92 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.88■□□□□ 0.13
SNX27Q96L92 SPTLC1P5-201ENST00000450718 252 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.88■□□□□ 0.13
SNX27Q96L92 AC245884.6-201ENST00000515672 1067 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 AC009779.1-201ENST00000551138 283 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.88■□□□□ 0.13
SNX27Q96L92 RBM8B-201ENST00000555532 525 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.88■□□□□ 0.13
SNX27Q96L92 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SNX27Q96L92 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.88■□□□□ 0.13
SNX27Q96L92 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 MTHFR-210ENST00000641407 2387 ntBASIC15.88■□□□□ 0.13
SNX27Q96L92 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SNX27Q96L92 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SNX27Q96L92 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SNX27Q96L92 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.88■□□□□ 0.13
SNX27Q96L92 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNX27Q96L92 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.88■□□□□ 0.13
SNX27Q96L92 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.87■□□□□ 0.13
SNX27Q96L92 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.87■□□□□ 0.13
SNX27Q96L92 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.87■□□□□ 0.13
SNX27Q96L92 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.87■□□□□ 0.13
SNX27Q96L92 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.87■□□□□ 0.13
SNX27Q96L92 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SNX27Q96L92 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SNX27Q96L92 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX27Q96L92 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.87■□□□□ 0.13
SNX27Q96L92 CYP46A4P-201ENST00000414953 267 ntBASIC15.87■□□□□ 0.13
SNX27Q96L92 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.87■□□□□ 0.13
SNX27Q96L92 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.87■□□□□ 0.13
SNX27Q96L92 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.87■□□□□ 0.13
SNX27Q96L92 AC125604.1-201ENST00000496255 707 ntBASIC15.87■□□□□ 0.13
SNX27Q96L92 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.87■□□□□ 0.13
SNX27Q96L92 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.87■□□□□ 0.13
SNX27Q96L92 MIR3147-201ENST00000577811 66 ntBASIC15.87■□□□□ 0.13
SNX27Q96L92 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.87■□□□□ 0.13
SNX27Q96L92 AC097724.1-201ENST00000609581 426 ntBASIC15.87■□□□□ 0.13
SNX27Q96L92 RN7SL736P-201ENST00000613111 269 ntBASIC15.87■□□□□ 0.13
SNX27Q96L92 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.87■□□□□ 0.13
SNX27Q96L92 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms