Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 AC016397.2-201ENST00000624848 1985 ntBASIC15.65■□□□□ 0.1
TRIM11Q96F44 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM11Q96F44 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM11Q96F44 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 C2orf27AP3-201ENST00000434123 579 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 RN7SL752P-201ENST00000463779 287 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 AC106760.1-201ENST00000508690 800 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 AP001889.1-201ENST00000525414 633 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 AC025279.2-201ENST00000569730 653 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 AL354718.3-201ENST00000616414 581 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 AC020910.5-201ENST00000623668 1865 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 CR382287.1-201ENST00000623954 586 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 AL590440.2-201ENST00000641973 1595 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 AL928921.2-201ENST00000641325 2442 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM11Q96F44 AC117489.1-201ENST00000625169 3217 ntBASIC15.64■□□□□ 0.09
TRIM11Q96F44 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM11Q96F44 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 AL391280.1-201ENST00000506969 1062 ntBASIC15.63■□□□□ 0.09
TRIM11Q96F44 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms