Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AC087386.2-201ENST00000623212 4637 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AC020910.5-201ENST00000623668 1865 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 RN7SKP175-201ENST00000408472 289 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 CD8B2-202ENST00000417670 633 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 CNN2P8-201ENST00000421872 913 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AL590640.2-201ENST00000457038 527 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 ALG3P1-201ENST00000508806 1114 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 KRT90P-201ENST00000549264 1064 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 AC012645.4-201ENST00000610691 1061 ntBASIC15.25■□□□□ 0.03
HDAC11Q96DB2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.25■□□□□ 0.03
HDAC11Q96DB2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 FAM197Y7-201ENST00000432892 766 ntBASIC15.24■□□□□ 0.03
HDAC11Q96DB2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.24■□□□□ 0.03
HDAC11Q96DB2 BX088702.1-201ENST00000610784 235 ntBASIC15.24■□□□□ 0.03
HDAC11Q96DB2 AC244669.2-201ENST00000612320 853 ntBASIC15.24■□□□□ 0.03
HDAC11Q96DB2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms