Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.71■□□□□ 0.11
DDX1Q92499 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
DDX1Q92499 AC020910.6-201ENST00000623084 1459 ntBASIC15.71■□□□□ 0.1
DDX1Q92499 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
DDX1Q92499 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
DDX1Q92499 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DDX1Q92499 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.71■□□□□ 0.1
DDX1Q92499 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 AC041040.2-201ENST00000622926 2899 ntBASIC15.7■□□□□ 0.1
DDX1Q92499 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
DDX1Q92499 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
DDX1Q92499 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 CICP16-201ENST00000502609 2813 ntBASIC15.7■□□□□ 0.1
DDX1Q92499 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.7■□□□□ 0.1
DDX1Q92499 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 AL662890.1-201ENST00000396818 632 ntBASIC15.7■□□□□ 0.1
DDX1Q92499 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.7■□□□□ 0.1
DDX1Q92499 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.7■□□□□ 0.1
DDX1Q92499 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 AC253536.4-201ENST00000440539 267 ntBASIC15.7■□□□□ 0.1
DDX1Q92499 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.7■□□□□ 0.1
DDX1Q92499 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.7■□□□□ 0.1
DDX1Q92499 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
DDX1Q92499 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.7■□□□□ 0.1
DDX1Q92499 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.7■□□□□ 0.1
DDX1Q92499 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.7■□□□□ 0.1
DDX1Q92499 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
DDX1Q92499 AL358472.3-201ENST00000608147 415 ntBASIC15.7■□□□□ 0.1
DDX1Q92499 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.7■□□□□ 0.1
DDX1Q92499 AC002472.3-201ENST00000640124 621 ntBASIC15.7■□□□□ 0.1
DDX1Q92499 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.7■□□□□ 0.1
DDX1Q92499 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
DDX1Q92499 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DDX1Q92499 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.69■□□□□ 0.1
DDX1Q92499 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
DDX1Q92499 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.69■□□□□ 0.1
DDX1Q92499 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.69■□□□□ 0.1
DDX1Q92499 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
DDX1Q92499 MIR663B-201ENST00000408361 115 ntBASIC15.69■□□□□ 0.1
DDX1Q92499 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.69■□□□□ 0.1
DDX1Q92499 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.69■□□□□ 0.1
DDX1Q92499 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.69■□□□□ 0.1
DDX1Q92499 RPL13AP20-201ENST00000459725 609 ntBASIC15.69■□□□□ 0.1
DDX1Q92499 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.69■□□□□ 0.1
DDX1Q92499 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.69■□□□□ 0.1
DDX1Q92499 COX5BP1-201ENST00000507622 393 ntBASIC15.69■□□□□ 0.1
DDX1Q92499 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.69■□□□□ 0.1
DDX1Q92499 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DDX1Q92499 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.69■□□□□ 0.1
DDX1Q92499 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.69■□□□□ 0.1
DDX1Q92499 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.69■□□□□ 0.1
DDX1Q92499 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 KRT8P28-201ENST00000433288 1390 ntBASIC15.69■□□□□ 0.1
DDX1Q92499 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.69■□□□□ 0.1
DDX1Q92499 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DDX1Q92499 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DDX1Q92499 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DDX1Q92499 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms