Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 ELL2P1-201ENST00000413990 1906 ntBASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB3IL1Q8TBN0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AC130686.1-201ENST00000622936 2466 ntBASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AC004945.1-201ENST00000416738 983 ntBASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 AC004461.2-201ENST00000629517 803 ntBASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IL1Q8TBN0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 CEND1P1-201ENST00000451006 455 ntBASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 SNHG9-202ENST00000564014 471 ntBASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 MIR4453-201ENST00000584019 89 ntBASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 AC092364.2-202ENST00000597012 1073 ntBASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3IL1Q8TBN0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms