Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KLF2P4-201ENST00000451959 1225 ntBASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 BNIP3P42-201ENST00000454982 569 ntBASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 BNIP3P29-201ENST00000598302 571 ntBASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AC073413.1-201ENST00000603927 732 ntBASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AC011447.5-201ENST00000616168 564 ntBASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AL033527.4-201ENST00000641026 673 ntBASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AC011498.7-201ENST00000624986 2027 ntBASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 RN7SL713P-201ENST00000582127 302 ntBASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MIR6074-201ENST00000612054 107 ntBASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MIR6799-201ENST00000620297 69 ntBASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 AC002472.3-201ENST00000640124 621 ntBASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH19Q8TAB3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms