Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AC139749.1-202ENST00000617529 3139 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AC005912.2-201ENST00000619492 2400 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 ANKRD19P-201ENST00000338192 862 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 KLF2P4-201ENST00000451959 1225 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CTBP2P5-201ENST00000454986 1264 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SNX29P1-201ENST00000548357 1007 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AL359881.2-201ENST00000602973 570 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 MIR6805-201ENST00000615055 62 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 RHOXF1P1-202ENST00000635473 501 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AP001267.2-201ENST00000532619 2086 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 AL354989.2-201ENST00000435838 1540 ntBASIC12.98□□□□□ -0.33
CPEB3Q8NE35 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPEB3Q8NE35 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 AC023908.3-201ENST00000564211 3047 ntBASIC12.97□□□□□ -0.33
CPEB3Q8NE35 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 AC079781.5-202ENST00000641784 3743 ntBASIC12.97□□□□□ -0.33
CPEB3Q8NE35 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPEB3Q8NE35 RN7SKP175-201ENST00000408472 289 ntBASIC12.97□□□□□ -0.33
CPEB3Q8NE35 MIR1202-201ENST00000408529 83 ntBASIC12.97□□□□□ -0.33
CPEB3Q8NE35 MIR1909-201ENST00000411312 80 ntBASIC12.97□□□□□ -0.33
CPEB3Q8NE35 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms