Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 DGCR5-201ENST00000399539 862 ntBASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 AC093433.1-201ENST00000458048 571 ntBASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 RPSAP52-203ENST00000622976 1023 ntBASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 AL137784.3-201ENST00000623858 2288 ntBASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 LRRC59-203ENST00000576448 1531 ntBASIC12.32□□□□□ -0.44
ZNF439Q8NDP4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 CRB3P1-201ENST00000449338 276 ntBASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 KRT18P25-201ENST00000508931 1278 ntBASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AC009486.1-201ENST00000569860 813 ntBASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AL033527.5-201ENST00000641382 801 ntBASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms