Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 MIR1301-201ENST00000408518 82 ntBASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 MIR5001-201ENST00000580185 100 ntBASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 AP001267.2-201ENST00000532619 2086 ntBASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 NME6-208ENST00000435684 599 ntTSL 2 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 RPL3P5-201ENST00000441645 1232 ntBASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 GNG10P1-201ENST00000452289 199 ntBASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 IGHV1-12-201ENST00000518307 205 ntBASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 AC226150.1-201ENST00000544259 466 ntBASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC22.42■■□□□ 1.18
CFAP43Q8NDM7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 AC011498.7-201ENST00000624986 2027 ntBASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 AC106827.1-201ENST00000366454 431 ntBASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 ACTG1P19-201ENST00000418987 1116 ntBASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 RN7SL530P-201ENST00000485097 298 ntBASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 AC021016.3-201ENST00000608367 477 ntBASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 CCT8L1P-201ENST00000465400 1674 ntBASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP43Q8NDM7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 CYP4F36P-201ENST00000589193 186 ntBASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 AC021305.1-201ENST00000520656 1514 ntBASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP43Q8NDM7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 TEKT4P2-202ENST00000559466 1312 ntBASIC22.39■■□□□ 1.18
CFAP43Q8NDM7 HYMAI-201ENST00000635591 3347 ntBASIC22.39■■□□□ 1.17
CFAP43Q8NDM7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP43Q8NDM7 AL109809.1-201ENST00000418979 1367 ntBASIC22.39■■□□□ 1.17
CFAP43Q8NDM7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP43Q8NDM7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CFAP43Q8NDM7 SCARNA12-201ENST00000459155 270 ntBASIC22.39■■□□□ 1.17
CFAP43Q8NDM7 ALG1L3P-201ENST00000503331 765 ntBASIC22.39■■□□□ 1.17
CFAP43Q8NDM7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms